CDS

Accession Number TCMCG066C25719
gbkey CDS
Protein Id XP_034603775.1
Location join(559832..561112,561717..561913,562012..562126,563692..563778)
Gene LOC117863951
GeneID 117863951
Organism Setaria viridis

Protein

Length 559aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA633601
db_source XM_034747884.1
Definition serine/arginine repetitive matrix protein 1-like isoform X1 [Setaria viridis]

EGGNOG-MAPPER Annotation

COG_category S
Description HhH-GPD superfamily base excision DNA repair protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10801        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03410        [VIEW IN KEGG]
map03410        [VIEW IN KEGG]
GOs GO:0000700        [VIEW IN EMBL-EBI]
GO:0000785        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003690        [VIEW IN EMBL-EBI]
GO:0003696        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004518        [VIEW IN EMBL-EBI]
GO:0004519        [VIEW IN EMBL-EBI]
GO:0004520        [VIEW IN EMBL-EBI]
GO:0004536        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006220        [VIEW IN EMBL-EBI]
GO:0006244        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006284        [VIEW IN EMBL-EBI]
GO:0006285        [VIEW IN EMBL-EBI]
GO:0006304        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006753        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008263        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009117        [VIEW IN EMBL-EBI]
GO:0009166        [VIEW IN EMBL-EBI]
GO:0009219        [VIEW IN EMBL-EBI]
GO:0009223        [VIEW IN EMBL-EBI]
GO:0009262        [VIEW IN EMBL-EBI]
GO:0009264        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009394        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0016799        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019104        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019439        [VIEW IN EMBL-EBI]
GO:0019637        [VIEW IN EMBL-EBI]
GO:0019692        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034404        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0034655        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044270        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044283        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045008        [VIEW IN EMBL-EBI]
GO:0046386        [VIEW IN EMBL-EBI]
GO:0046434        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046700        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055086        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072527        [VIEW IN EMBL-EBI]
GO:0072529        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901136        [VIEW IN EMBL-EBI]
GO:1901292        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901361        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1990837        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGGTGGCGGCGCCGGCGGCCATGGTAGAGGGGTGGGAGGCGATGCGGCAGAAGAAGAGGAGGAAGAGGCACAGGGAGGAGGTGGAGGTTGCGGTTTCTTCCTCGGAGTCTCCTCGACCTCCGGCGACTCCGGATTCGAAGACCGAGTCTCCGCCCCTAGTCACTGCCGAAACCCTAACCTTGACGGGGGTGGCGGCGGGCAAGGGGCGCAAGAGGAAGAAGCAGGAGGTGGCGGCGGCGTCTTCGTTGGTGGAGGAGGCCGTCCGGAAGGAGGAGAAAAAGAAGGGCAAGAGAAGCAAACACGAGGCGGCGGCGGCGGCAACTCCATCGCCGTCAATCCCTGCGGCGGCGGCGGCCACCGCCCAAATCTTGGAGGTGGCGGCGGCGTCTTCGTTGGTGGAGGAGGCCGTCCAGAAGGAGGAGAAAAAGAAGGGCAAGAGAAGCAAGCACGAGGCGGCGGCGGCAACTCTATCGCCGTCGATCCCTGCGGGGGCAGCCACCTTCCAAATCTTGGAGGTGGCCGCGGAACGGGCGGCAGCGAGGAAGGAGCAGAGACGGGGTAAGCTGGAGCAGGGGCAATCCGGCCAGCAGACATCACCCGTTGATGTCCATCCCCAAGGAGGGGAAGCAGTAGTTGATGGTGGCGTCAGTGGTAGTAAGAGTGTCAGGAGGAGAAGCAGCGGCAAGCCTCGAGTGCTGACCGATCAGGAGATCCTCAGGATGAGAATAGCGTCGTTGAAAGAACAGCCAGTGCCCCAAGGCTTGGTCCCCGCCATGGCCAATCCCAACTCCATTGATCAGGACCCCAAATATTCCTCGCCTTTTGGTGCATTCTTCGACCAGTTCTGCTACAGACCTGAACGCCGGCAAGGTCGCAATGCTCCGTCACTTCCGAAAACCCCTGATCCTCCAGCCAGGCCGCCTCCTCGAGATCACCTGTCATTTCTGTCTTCTCAGCTCACTGCAAATCAAAAGGCTGCCAAGACAACGACCTTGAACACAAAGCGACCACCCTCAGCCTCAGGTTCGCAAGTAGCGGTAAAGGCAAAAGAAAAGAAAAGACCTGATGAGAAGATGGACACGACGAAGAAGCCAAGAAAGAAACCACCATTGCTTAGTGCTGCTGAGAAGCGGTCAGACAAGTACCGTCGCCTGCCGCTGAATCAGCTGGTACCCCCGCCGCGTTCCCCTTATAATCTCCTGCAGGAGAGGTACGCACATGACCCCTGGAAGGTCATTATAATATGCATGCTCCTCAACTTATCAAAAGGAGATCAGGTCAAGAAGAAATTGAAGGGCTTCTTCAGACGCTATCCTGATGCACAGACTGCATGTACAGCTGATCCTGAAAAGATGGCAGAGTATCTAGCACCTCTGGGGTTGCAGCGTGTGAAAGCAAACAGAATCCAGAAATTGTCTAAGGATTATGTTTCAGAGGAATGGACCTACATTACAGAGCTTTTTGGCGTTGGCAAGTATGCCGCTGATGCTTACGCAATCTTTTGTGCTGGAAGAGCAACAGAGGTGGTTCCAGAAGATCACAAGTTAGTTGATTACTGGAAGTATGTCTGCTTTGAGTTACCAACTCAGGCATCACAGAATGTGGAGGAGGCTGCAGGAGTGACTGGGCAGGGAAACTTTGCTCCTGCGGTTCAGCAAATTGCTGTGAGCTGTTGA
Protein:  
MSVAAPAAMVEGWEAMRQKKRRKRHREEVEVAVSSSESPRPPATPDSKTESPPLVTAETLTLTGVAAGKGRKRKKQEVAAASSLVEEAVRKEEKKKGKRSKHEAAAAATPSPSIPAAAAATAQILEVAAASSLVEEAVQKEEKKKGKRSKHEAAAATLSPSIPAGAATFQILEVAAERAAARKEQRRGKLEQGQSGQQTSPVDVHPQGGEAVVDGGVSGSKSVRRRSSGKPRVLTDQEILRMRIASLKEQPVPQGLVPAMANPNSIDQDPKYSSPFGAFFDQFCYRPERRQGRNAPSLPKTPDPPARPPPRDHLSFLSSQLTANQKAAKTTTLNTKRPPSASGSQVAVKAKEKKRPDEKMDTTKKPRKKPPLLSAAEKRSDKYRRLPLNQLVPPPRSPYNLLQERYAHDPWKVIIICMLLNLSKGDQVKKKLKGFFRRYPDAQTACTADPEKMAEYLAPLGLQRVKANRIQKLSKDYVSEEWTYITELFGVGKYAADAYAIFCAGRATEVVPEDHKLVDYWKYVCFELPTQASQNVEEAAGVTGQGNFAPAVQQIAVSC